Figure 1
Gene set enrichment analysis (GSEA) and validation of selected genes in INS-1E cells exposed to cytokines and HDAC inhibitors.
(A) INS-1E cells were exposed to cytokines (IL-1β + TNFα + IFNγ) ± the HDAC1–3 selective inhibitor MS-275 or the HDAC1–2 selective
inhibitor ‘3’ for 6 h. RNA was purified, and a microarray followed by GSEA was performed. The top scoring gene set is shown
here. Selected gene expressions are highlighted in yellow, n = 1. (B, C, D and E) INS-1E cells were exposed to vehicle (white bars), cytokines (black bars) ± MS-275 (light grey bars)
or BRD0476 (dark grey bars) for 3, 6, 9, 12 or 24 h. Expression of (B) Psma2, (C) Psme1, (D) Psma7, (E) Psmb10 was analyzed by qPCR. Results are shown as means + s.e.m., n = 4. *P < 0.05, **P < 0.01 and ***P < 0.001 vs vehicle (CTRL), #P < 0.05, ###P < 0.001 vs cytokines.